Nature
Unique Genetic Code Of SR1 Bacteria Decrypted
Mark Hoffman
First Posted: Mar 19, 2013 12:10 AM EDT
The SR1 bacteria is a group of microbes that live in the human mounth, among many other places, but that have never been cultivated in a laboratory until now. But now scientists managed as a first step to decypher the genetic code of this bacteria, that can unfortunately cause periodontitis in our mouth. What they found is surprising, since the bacteria apparently uses the genetic alphabet in a very different way than other bacteria. This discovery could tell a story about what not only goes on in the recesses of the human mouth, but also on Earth itself.
Scientists found that the SR1 bacteria employ a unique genetic code in which the codon UGA - a sequence of nucleotides guiding protein synthesis - appears not to serve its normal role as a stop code. In fact, scientists found that UGA serves to introduce a glycine amino acid instead, a release from Oak Ridge National Laboratory stated.
The researchers believe the altered genetic code limits the exchange of genes between SR1 and other bacteria because they use a different genetic alphabet.
"In the big pool of bacteria, genes can be exchanged between species and can contribute to increased antibiotic resistance or better adaptation to living in humans," Podar said. "Because SR1 has a change in its genetic alphabet, its genes will not function in other microbes."
The finding will help forge a path towards better understanding of microbiological factors of periodontitis, as well as to help establish a framework that will enable scientists to interpret genomic data from the SR1 bacteria and others that have the same altered genetic code.
The SR1 bacteria are elevated in periodontitis, a disease marked by inflammation and infection of the ligaments and bones that support the teeth. but are found in many diverse environments including the human mouth, rivers, lakes and even termites.
Podar noted that the SR1 bacteria was one of many bacteria found in the human mouth that little was known about. So far, no one has been able to isolate and cultivate the SR1 bacteria, but since the SR1's genetic code has been cracked, researchers may soon be able to reproduce the bacteria in a lab.
"The genetic information obtained by sequencing one single cell may offer researchers a key to 'domesticating' these organisms and studying them in the laboratory."
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First Posted: Mar 19, 2013 12:10 AM EDT
The SR1 bacteria is a group of microbes that live in the human mounth, among many other places, but that have never been cultivated in a laboratory until now. But now scientists managed as a first step to decypher the genetic code of this bacteria, that can unfortunately cause periodontitis in our mouth. What they found is surprising, since the bacteria apparently uses the genetic alphabet in a very different way than other bacteria. This discovery could tell a story about what not only goes on in the recesses of the human mouth, but also on Earth itself.
Scientists found that the SR1 bacteria employ a unique genetic code in which the codon UGA - a sequence of nucleotides guiding protein synthesis - appears not to serve its normal role as a stop code. In fact, scientists found that UGA serves to introduce a glycine amino acid instead, a release from Oak Ridge National Laboratory stated.
The researchers believe the altered genetic code limits the exchange of genes between SR1 and other bacteria because they use a different genetic alphabet.
"In the big pool of bacteria, genes can be exchanged between species and can contribute to increased antibiotic resistance or better adaptation to living in humans," Podar said. "Because SR1 has a change in its genetic alphabet, its genes will not function in other microbes."
The finding will help forge a path towards better understanding of microbiological factors of periodontitis, as well as to help establish a framework that will enable scientists to interpret genomic data from the SR1 bacteria and others that have the same altered genetic code.
The SR1 bacteria are elevated in periodontitis, a disease marked by inflammation and infection of the ligaments and bones that support the teeth. but are found in many diverse environments including the human mouth, rivers, lakes and even termites.
Podar noted that the SR1 bacteria was one of many bacteria found in the human mouth that little was known about. So far, no one has been able to isolate and cultivate the SR1 bacteria, but since the SR1's genetic code has been cracked, researchers may soon be able to reproduce the bacteria in a lab.
"The genetic information obtained by sequencing one single cell may offer researchers a key to 'domesticating' these organisms and studying them in the laboratory."
See Now: NASA's Juno Spacecraft's Rendezvous With Jupiter's Mammoth Cyclone